BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020F02LP1|AL427641
(1026 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig370 1475 0.0
>3x_Contig370
Length = 983
Score = 1475 bits (743), Expect = 0.0
Identities = 766/770 (99%), Gaps = 3/770 (0%)
Strand = Plus / Plus
Query: 246 cgtncttattattaaagtacagaataacactctttgttgtgttgctcgcaacctgaaaag 305
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgtgcttattattaaagtacagaataacactctttgttgtgttgctcgcaacctgaaaag 60
Query: 306 aaatgtgtattactggtcaaacaaagaagaaaacacaccccaaatacaaagagttaagga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatgtgtattactggtcaaacaaagaagaaaacacaccccaaatacaaagagttaagga 120
Query: 366 cttacccaataatccgaaacaaaccccactctgacagaagatgattaagccgactggtac 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttacccaataatccgaaacaaaccccactctgacagaagatgattaagccgactggtac 180
Query: 426 tctcttttctcttctctcttccaatcttcctattaacgatcaatcggtaattacgtttcg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctcttttctcttctctcttccaatcttcctattaacgatcaatcggtaattacgtttcg 240
Query: 486 cctctcaaaacaataatatttcaatttcaagcttccagagtattttttttcttcactata 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctctcaaaacaataatatttcaatttcaagcttccagagtattttttttcttcactata 300
Query: 546 aagagaacatcatttcccacgtcacaaacgggtaacagcatttattcaaaaatttcaata 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagagaacatcatttcccacgtcacaaacgggtaacagcatttattcaaaaatttcaata 360
Query: 606 tatcaggtcacgtgaagatcatttcctacgctctgatttttccaataaaaaatctttctt 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatcaggtcacgtgaagatcatttcctacgctctgatttttccaataaaaaatctttctt 420
Query: 666 ctaaaacatcccagagctctccagttttgtacgacatattctacgttagattcgtgccaa 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctaaaacatcccagagctctccagttttgtacgacatattctacgttagattcgtgccaa 480
Query: 726 aatgtgtactcatcagcttttctaatatctactaacatggaaaatgagtattttaaagct 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatgtgtactcatcagcttttctaatatctactaacatggaaaatgagtattttaaagct 540
Query: 786 tttcattgaaatgatttcgattttaaacattaagatttgtatgaagatgaggcttctaag 845
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 541 tttcattgaaatgatttcgatttt-aacattaagatttgtatgaagatgaggcttctaag 599
Query: 846 agacgcatacaagaacaggattatttgggacttttcagttgcgagtgcagagcgaagtga 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 agacgcatacaagaacaggattatttgggacttttcagttgcgagtgcagagcgaagtga 659
Query: 906 agtagtaatctttgcgccagtgtttctgttcaatatctataacaaatgcctcgttttttc 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 agtagtaatctttgcgccagtgtttctgttcaatatctataacaaatgcctcgttttttc 719
Query: 966 ccatctctcaaacagggtttgagaaa-cttgctactgcgg-agagacgga 1013
|||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 720 ccatctctcaaacagggtttgagaaaccttgctactgcggtagagacgga 769
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9909
Number of Sequences: 1807
Number of extensions: 9909
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 1026
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1010
effective length of database: 10,329,639
effective search space: 10432935390
effective search space used: 10432935390
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)